Difference between revisions of "Data model"

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* GBIF IPT table for easy 1:1 integration (Spring 2011)
 
* GBIF IPT table for easy 1:1 integration (Spring 2011)
  
=== In progress additions ===
+
=== In progress additions/modifications ===
  
 
* The phenotype cluster is presently (January 2011) in development and will likely evolve slightly in the following weeks
 
* The phenotype cluster is presently (January 2011) in development and will likely evolve slightly in the following weeks
 +
* The sequence module is being revised slightly (January 2011)- long term plans for the Sequence table is to adopt a GMOD/Chado-esque approach
  
 
=== In Rails ===
 
=== In Rails ===

Latest revision as of 10:24, 25 January 2011

Contents

[edit] Schema

The schema is available here. See also a Data dictionary and below.

[edit] Planned deprecations

  • Type information is now tied through type specimens, not through fields in the TaxonName table.
  • Statements table is legacy and not used.
  • Xyl tables are install-specific and can be ignored.

[edit] Planned additions

  • GBIF IPT table for easy 1:1 integration (Spring 2011)

[edit] In progress additions/modifications

  • The phenotype cluster is presently (January 2011) in development and will likely evolve slightly in the following weeks
  • The sequence module is being revised slightly (January 2011)- long term plans for the Sequence table is to adopt a GMOD/Chado-esque approach

[edit] In Rails

You can also see the full schema used by Rails by dumping it via rake task like so:

 rake db:schema:dump

[edit] Other

The figure below highlights some of the connections to the OTU model. not all foreign keys are shown.

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