Difference between revisions of "Use"

From mx Help Wiki
Jump to: navigation, search
m (Publications moved to Use: More inclusive.)
m
 
(6 intermediate revisions by one user not shown)
Line 1: Line 1:
 +
== Labs and Organizations ==
 +
 +
''This is a list of those who have made significant use of mx.''
 +
 +
* [http://hymao.org The Hymenoptera Anatomy Ontology] (HAO)
 +
** Includes the publicly accessible [http://glossary.hymao.org glossary]
 +
** NSF funded ABI
 +
 +
* [http://treehoppers.insectmuseum.org/ Treehoppers: Aetalionidae, Melizoderidae, and Membracidae (Hemiptera)] ([http://www.esu.edu/~mwallace Matt Wallace], Lew Dietz et al.)
 +
** Multi-entry key for North American leafhopper genera, taxonomic catalog, images, etc.
 +
 +
* [http://www.paroffit.org/ Parasitoids of Fruit Infesting Tephritidae] (Bob Wharton)
 +
** Taxon pages, keys, images.
 +
 +
* [http://insectmuseum.org/  The North Carolina State Insect Museum]
 +
** Inventory, [http://blog.insectmuseum.org/ bloggable taxon pages], specimen collection database
 +
 +
* [http://diapriid.org/ The Diapriidae] (Matt Yoder)
 +
** Host-parasite database, images, keys
 +
 +
* [http://hymenoptera.tamu.edu The Wharton Lab]
 +
** Lab images, matrices, taxon pages, references, taxonomic catalogs, host-parasite databases
 +
** [http://peet.tamu.edu/projects/8/public/site/ich/home PEET Ichneumonoidea]
 +
 +
* [http://deanslab.info Andy Deans Lab]
 +
** Comprehensive data handling: specimens, sequences, images, matrices, taxonomic descriptions, etc.
 +
 +
* [http://hymenoptera.ucr.edu John Heraty Lab]
 +
** Chalcidoid super matrix for HymATOL, over 400 illustrated characters by 80 taxa, lab matrices
 +
 +
* [http://www.amentinst.org/index.php The American Entomological Institute]
 +
** Keys, news, image management.
 +
 +
* [http://www.evanioidea.info Evanioidea Online]
 +
** Taxonomic catalog for all of Evanioidea, keys, taxon pages, specimens.
 +
 +
* [http://xyleborini.tamu.edu The HISL Lab]
 +
** [http://xyleborini.tamu.edu Taxonomic catalog for all xyleborine species] (Curculionidae: Scolytinae).  This relational database currently contains all 1,288 valid taxa and 469 synonyms, 5,000 locality and host entries and 19,000 citations.  It surpasses the bounded catalog (Wood & Bright 1992) with the integration of bibliographical information for each taxonomic entry.  Full references are given for 97% of the citations. It is easily updated, revised and accessible to those interested in scolytine taxonomy, pest species, and biodiversity studies.
 +
** A literature database of scolytine of approximately 27,000 references spanning the 1700?s to 2000. This database includes most of the literature contained in Wood (1987), Wood & Bright (1992), and Bright & Skidmore (1997, 2002).
 +
** Electronic Monograph of Camptocerus. ~200 images, ~60 characters, label data for ~100 specimens, ~100 references, and a key to four species. Upon completion the monograph will address 45 OTUs, contain label data for ~500 specimens and display ~32 species pages. Approximate data of completion January 1, 2010.
 +
 +
* [http://www4.ncsu.edu/unity/users/b/bwiegman/public_html/labweb/ Brian Wiegman Lab] (Isaac Winkler)
 +
** Systematics of Empididae
 +
 +
* François Michonneau
 +
** [http://francoismichonneau.net/ Systematics of Sea Cucumbers]
 +
 +
* Aaron Smith, Arizona State University
 +
** Catalog of Tenebrionidae
 +
 
== Publications ==
 
== Publications ==
  
Line 6: Line 56:
  
 
*<p>Yoder, M.J. 2007.  Mannomicrus (Hymenoptera: Diapriidae), a new genus of myrmecophilic diapriid, with a digital version of Masner and Garcia's (2002) key to New World Diapriinae and an illustration of digital description and key markup using an ontology. Zootaxa 1439: 47-55 [http://www.mapress.com/zootaxa/2007f/zt01439p055.pdf pdf], [http://www.diapriid.org webpage]</p>
 
*<p>Yoder, M.J. 2007.  Mannomicrus (Hymenoptera: Diapriidae), a new genus of myrmecophilic diapriid, with a digital version of Masner and Garcia's (2002) key to New World Diapriinae and an illustration of digital description and key markup using an ontology. Zootaxa 1439: 47-55 [http://www.mapress.com/zootaxa/2007f/zt01439p055.pdf pdf], [http://www.diapriid.org webpage]</p>
 
  
 
== Presentations ==
 
== Presentations ==
 +
 +
*<p>Deans, A., and Yoder, M. J. 2009. Developing a Hymenopteran ontology.  Society for Integrative and Comparative Biology. Boston, MA.</p>
  
 
*<p>Yoder, M.J. 2007. Collaboration in systematic biology.  TAMU Dept. of Entomology Seminar Series.</p>
 
*<p>Yoder, M.J. 2007. Collaboration in systematic biology.  TAMU Dept. of Entomology Seminar Series.</p>

Latest revision as of 12:40, 16 February 2011

Contents

[edit] Labs and Organizations

This is a list of those who have made significant use of mx.

  • Andy Deans Lab
    • Comprehensive data handling: specimens, sequences, images, matrices, taxonomic descriptions, etc.
  • John Heraty Lab
    • Chalcidoid super matrix for HymATOL, over 400 illustrated characters by 80 taxa, lab matrices
  • Evanioidea Online
    • Taxonomic catalog for all of Evanioidea, keys, taxon pages, specimens.
  • The HISL Lab
    • Taxonomic catalog for all xyleborine species (Curculionidae: Scolytinae). This relational database currently contains all 1,288 valid taxa and 469 synonyms, 5,000 locality and host entries and 19,000 citations. It surpasses the bounded catalog (Wood & Bright 1992) with the integration of bibliographical information for each taxonomic entry. Full references are given for 97% of the citations. It is easily updated, revised and accessible to those interested in scolytine taxonomy, pest species, and biodiversity studies.
    • A literature database of scolytine of approximately 27,000 references spanning the 1700?s to 2000. This database includes most of the literature contained in Wood (1987), Wood & Bright (1992), and Bright & Skidmore (1997, 2002).
    • Electronic Monograph of Camptocerus. ~200 images, ~60 characters, label data for ~100 specimens, ~100 references, and a key to four species. Upon completion the monograph will address 45 OTUs, contain label data for ~500 specimens and display ~32 species pages. Approximate data of completion January 1, 2010.
  • Aaron Smith, Arizona State University
    • Catalog of Tenebrionidae

[edit] Publications

  • Wharton, R.A., Roeder, K. and Yoder, M.J. In Press for Zootaxa. A Monograph of the genus Westwoodia (Hymenoptera: Ichneumonidae)

  • Deans, A. R. & R. Kawada. 2008. Alobevania, a new genus of neotropical ensign wasps (Hymenoptera: Evaniidae), with three new species: integrating taxonomy with the World Wide Web. Zootaxa 1787: 28-44.pdf, webpage

  • Yoder, M.J. 2007. Mannomicrus (Hymenoptera: Diapriidae), a new genus of myrmecophilic diapriid, with a digital version of Masner and Garcia's (2002) key to New World Diapriinae and an illustration of digital description and key markup using an ontology. Zootaxa 1439: 47-55 pdf, webpage

[edit] Presentations

  • Deans, A., and Yoder, M. J. 2009. Developing a Hymenopteran ontology. Society for Integrative and Comparative Biology. Boston, MA.

  • Yoder, M.J. 2007. Collaboration in systematic biology. TAMU Dept. of Entomology Seminar Series.

  • Deans, A.R. and Yoder, M.J. 2006. Ontologizing morphological terms for Hymenoptera - implementing and benefiting from a controlled vocabulary. Entomological Society of America. Indianapolis, IN.

  • Yoder, M.J., Dole, K, Deans, A. 2006. Introducing 'mx', a sharable digital workbench for systematic biologists. Taxonomic Databases Working Group 2006 Annual Meeting

  • Yoder, M.J. 2006. 'mx' - A digital workbench for evolutionary systematists. TAMU Dept. of Entomology Annual Graduate Student Forum

[edit] Meetings

  • PEET Chalcidoidea. 2008. Riverside California.
Personal tools